Transcript: lnc-ZBTB18-9:2

Basic information

LNCipedia transcript ID: lnc-ZBTB18-9:2 
LNCipedia gene ID: lnc-ZBTB18-9
Location (hg38): chr1:243850409-243852804
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2134 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000041486.1|MICT00000034193.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.064 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB18-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF238-9:2
5.0 lnc-ZNF238-9:2
5.1 lnc-KMO-32:2
5.2 lnc-ZBTB18-9:2