Transcript: lnc-YTHDF3-6:1

Basic information

LNCipedia transcript ID: lnc-YTHDF3-6:1 
LNCipedia gene ID: lnc-YTHDF3-6
Location (hg38): chr8:63450370-63457213
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 598 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT126938; FPKM1_group_31446_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.3548 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-YTHDF3-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NKAIN3-6:2
4.0 lnc-NKAIN3-6:2
4.1 lnc-NKAIN3-6:2
5.0 lnc-NKAIN3-6:2
5.1 lnc-SGK3-34:1
5.2 lnc-YTHDF3-6:1