Transcript: lnc-XPNPEP3-4:2

Basic information

LNCipedia transcript ID: lnc-XPNPEP3-4:2 
LNCipedia gene ID: lnc-XPNPEP3-4
Location (hg38): chr22:40775516-40780480
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 654 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_2276_chr22:41171519-41176484_adrenal
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.7135 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XPNPEP3-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XPNPEP3-4:2
4.0 lnc-XPNPEP3-4:2
4.1 lnc-XPNPEP3-4:2
5.0 lnc-XPNPEP3-4:2
5.1 lnc-XPNPEP3-4:2
5.2 lnc-XPNPEP3-4:2