Transcript: lnc-XPC-10:3

Basic information

LNCipedia transcript ID: lnc-XPC-10:3 
LNCipedia gene ID: lnc-XPC-10
Location (hg38): chr3:14520692-14540337
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3439 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000144596.7|ENST00000413414.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2130.1341 coding 
CPAT coding probability 98.03% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-XPC-10:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-XPC-5:28
5.0 lnc-XPC-5:28
5.1 lnc-SH3BP5-24:3
5.2 lnc-XPC-10:3