Transcript: lnc-XKR9-1:3

Basic information

LNCipedia transcript ID: lnc-XKR9-1:3 
LNCipedia gene ID: lnc-XKR9-1
Location (hg38): chr8:70471106-70472467
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1362 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253967.1|ENCT00000426177.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 35.5315 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR9-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC120194.1-1:5
5.0 lnc-AC120194.1-1:5
5.1 lnc-SULF1-10:1
5.2 lnc-XKR9-1:3