Transcript: lnc-XKR5-1:4

Basic information

LNCipedia transcript ID: lnc-XKR5-1:4 
LNCipedia gene ID: lnc-XKR5-1
Location (hg38): chr8:6819962-6835522
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5278 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000186530.13|ENCT00000432080.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1443.6848 coding 
CPAT coding probability 99.85% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-XKR5-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DEFB1-1:10
5.0 lnc-DEFB1-1:10
5.1 lnc-DEFA1B-10:4
5.2 lnc-XKR5-1:4