Transcript: lnc-VSTM5-5:2

Basic information

LNCipedia transcript ID: lnc-VSTM5-5:2 
LNCipedia gene ID: lnc-VSTM5-5
Location (hg38): chr11:94059705-94067745
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 497 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA274:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -78.7324 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSTM5-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-VSTM5-5:2
4.1 lnc-VSTM5-5:2
5.0 lnc-VSTM5-5:2
5.1 lnc-NOX4-44:2
5.2 lnc-VSTM5-5:2