Transcript: lnc-VSIG10L2-1:2

Basic information

LNCipedia transcript ID: lnc-VSIG10L2-1:2 
LNCipedia gene ID: lnc-VSIG10L2-1
Location (hg38): chr11:125957900-125958647
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 748 bp
Exons: 1
Sources: Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000638781.1
Alternative gene names: ENSG00000283866.1; AP000842.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 9.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSIG10L2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-HINFP-102:2
5.1 lnc-HINFP-102:2
5.2 lnc-VSIG10L2-1:2