Transcript: lnc-VN1R2-5:9

Basic information

LNCipedia transcript ID: lnc-VN1R2-5:9 
LNCipedia gene ID: lnc-VN1R2-5
Location (hg38): chr19:53197101-53215210
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4521 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269051.1|FTMT27500011195.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.7064 non-coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VN1R2-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VN1R2-5:9
5.0 lnc-VN1R2-5:9
5.1 lnc-CACNG8-24:3
5.2 lnc-VN1R2-5:9