Transcript: lnc-VN1R1-3:2

Basic information

LNCipedia transcript ID: lnc-VN1R1-3:2 
LNCipedia gene ID: lnc-VN1R1-3
Location (hg38): chr19:57362759-57363253
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 495 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000041503.1|FTMT27400002706.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -55.5435 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VN1R1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VN1R1-3:2
5.0 lnc-VN1R1-3:2
5.1 lnc-ZNF772-6:2
5.2 lnc-VN1R1-3:2