Transcript: lnc-VKORC1L1-5:9

Basic information

LNCipedia transcript ID: lnc-VKORC1L1-5:9 
LNCipedia gene ID: lnc-VKORC1L1-5
Location (hg38): chr7:65827547-65828665
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 245 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014153; NONHSAT121121
Alternative gene names: XLOC_006132; linc-VKORC1L1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.0855 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VKORC1L1-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VKORC1L1-1:1
3.1 lnc-VKORC1L1-1:1
4.0 lnc-VKORC1L1-1:1
4.1 lnc-VKORC1L1-5:9
5.0 lnc-VKORC1L1-5:9
5.1 lnc-TPST1-5:10
5.2 lnc-VKORC1L1-5:9