Transcript: lnc-VGLL4-6:1

Basic information

LNCipedia transcript ID: lnc-VGLL4-6:1 
LNCipedia gene ID: lnc-VGLL4-6
Location (hg38): chr3:11150529-11151457
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 398 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087963
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.3077 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VGLL4-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VGLL4-6:1
4.0 lnc-VGLL4-6:1
4.1 lnc-VGLL4-6:1
5.0 lnc-VGLL4-6:1
5.1 lnc-SEC13-6:7
5.2 lnc-VGLL4-6:1