Transcript: lnc-VAV3-11:1

Basic information

LNCipedia transcript ID: lnc-VAV3-11:1 
LNCipedia gene ID: lnc-VAV3-11
Location (hg38): chr1:107046540-107056615
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 10076 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000069743.1|MICT00000016547.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.5728 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VAV3-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VAV3-11:1
5.0 lnc-VAV3-11:1
5.1 lnc-LAMTOR5-42:1
5.2 lnc-VAV3-11:1