Transcript: lnc-UXS1-4:3

Basic information

LNCipedia transcript ID: lnc-UXS1-4:3 
LNCipedia gene ID: lnc-UXS1-4
Location (hg38): chr2:105855106-105856746
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 334 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT072995; ENST00000598281.1
Alternative gene names: ENSG00000235522.2; AC009505.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.9192 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UXS1-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UXS1-4:3
4.0 lnc-UXS1-4:3
4.1 lnc-UXS1-4:3
5.0 lnc-UXS1-4:3
5.1 lnc-AFF3-82:7
5.2 lnc-UXS1-4:3