Transcript: lnc-UTS2-5:6

Basic information

LNCipedia transcript ID: lnc-UTS2-5:6 
LNCipedia gene ID: lnc-UTS2-5
Location (hg38): chr1:7701645-7704020
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 963 bp
Exons: 4
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1500:3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.5885 non-coding 
CPAT coding probability 5.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UTS2-5:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-UTS2-5:6
4.1 lnc-UTS2-5:6
5.0 lnc-UTS2-5:6
5.1 lnc-CLSTN1-34:2
5.2 lnc-UTS2-5:6