Transcript: lnc-UTRN-2:1

Basic information

LNCipedia transcript ID: lnc-UTRN-2:1 
LNCipedia gene ID: lnc-UTRN-2
Location (hg38): chr6:145148696-145154451
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 475 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011982; NONHSAT115390
Alternative gene names: XLOC_005493; linc-GRM1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -409.5738 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UTRN-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UTRN-2:1
3.1 lnc-UTRN-2:1
4.0 lnc-UTRN-2:1
4.1 lnc-UTRN-2:1
5.0 lnc-UTRN-2:1
5.1 lnc-ADGB-23:2
5.2 lnc-UTRN-2:1