Transcript: lnc-USP6NL-15:4

Basic information

LNCipedia transcript ID: lnc-USP6NL-15:4 
LNCipedia gene ID: lnc-USP6NL-15
Location (hg38): chr10:10824445-10834920
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 693 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001ikf_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -161.9528 non-coding 
CPAT coding probability 12.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP6NL-15:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf31-15:3
4.0 lnc-C10orf31-15:3
4.1 lnc-C10orf31-15:3
5.0 lnc-C10orf31-15:3
5.1 lnc-KLF6-132:4
5.2 lnc-USP6NL-15:4