Transcript: lnc-USP50-6:1

Basic information

LNCipedia transcript ID: lnc-USP50-6:1 
LNCipedia gene ID: lnc-USP50-6
Location (hg38): chr15:50593619-50599665
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 987 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT042430
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.7392 non-coding 
CPAT coding probability 90.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP50-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP50-6:1
4.0 lnc-USP50-6:1
4.1 lnc-USP50-6:1
5.0 lnc-USP50-6:1
5.1 lnc-DNAAF4-88:1
5.2 lnc-USP50-6:1