Transcript: lnc-USP49-3:1

Basic information

LNCipedia transcript ID: lnc-USP49-3:1 
LNCipedia gene ID: lnc-USP49-3
Location (hg38): chr6:41776419-41778176
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 780 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT112763
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 101.0178 coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP49-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP49-3:1
4.0 lnc-USP49-3:1
4.1 lnc-USP49-3:1
5.0 lnc-USP49-3:1
5.1 lnc-TREML2-21:1
5.2 lnc-USP49-3:1