Transcript: lnc-USP31-3:4

Basic information

LNCipedia transcript ID: lnc-USP31-3:4 
LNCipedia gene ID: lnc-USP31-3
Ensembl Gene ID: ENSG00000283213
Ensembl Transcript ID: ENST00000636354
Location (hg38): chr16:22806289-22813201
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 4683 bp
Exons: 3
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636354.1
Alternative gene names: ENSG00000283213.1; CTC-591M7.1; AC130466.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.2705 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP31-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-USP31-3:4
5.0 lnc-USP31-3:4
5.1 lnc-SULT1A2-205:3
5.2 lnc-USP31-3:4