Transcript: lnc-USP25-5:1

Basic information

LNCipedia transcript ID: lnc-USP25-5:1 
LNCipedia gene ID: lnc-USP25-5
Location (hg38): chr21:15510497-15511659
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 922 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2173_chr21:16882815-16883978_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.6097 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP25-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP25-5:1
4.0 lnc-USP25-5:1
4.1 lnc-USP25-5:1
5.0 lnc-USP25-5:1
5.1 lnc-OLIG1-128:1
5.2 lnc-USP25-5:1