Transcript: lnc-USP17L2-3:3

Basic information

LNCipedia transcript ID: lnc-USP17L2-3:3 
LNCipedia gene ID: lnc-USP17L2-3
Location (hg38): chr8:12183441-12186386
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1419 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT125124
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 71.7418 coding 
CPAT coding probability 22.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP17L2-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP17L2-3:3
4.0 lnc-USP17L2-3:3
4.1 lnc-USP17L2-3:3
5.0 lnc-USP17L2-3:3
5.1 lnc-PINX1-43:2
5.2 lnc-USP17L2-3:3