Transcript: lnc-USP14-2:1

Basic information

LNCipedia transcript ID: lnc-USP14-2:1 
LNCipedia gene ID: lnc-USP14-2
Location (hg38): chr18:109065-122217
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2455 bp
Exons: 5
Sources: Broad Institute
Alternative transcript names: TCONS_00026176
Alternative gene names: XLOC_012599; linc-USP14-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 407.1043 coding 
CPAT coding probability 35.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-USP14-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP14-2:1
3.1 lnc-USP14-2:1
4.0 lnc-USP14-2:1
4.1 lnc-USP14-2:1
5.0 lnc-USP14-2:1
5.1 lnc-RIOK3-319:1
5.2 lnc-USP14-2:1