Transcript: lnc-USP13-7:2

Basic information

LNCipedia transcript ID: lnc-USP13-7:2 
LNCipedia gene ID: lnc-USP13-7
Location (hg38): chr3:179969770-180016997
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2417 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000062986.1|MICT00000255372.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -117.8437 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP13-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-USP13-7:2
5.0 lnc-USP13-7:2
5.1 lnc-ACTL6A-10:2
5.2 lnc-USP13-7:2