Transcript: lnc-USP12-9:13

Basic information

LNCipedia transcript ID: lnc-USP12-9:13 
LNCipedia gene ID: lnc-USP12-9
Location (hg38): chr13:27207297-27208159
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 356 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021947; NONHSAT032640
Alternative gene names: XLOC_010542; linc-USP12-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.7658 non-coding 
CPAT coding probability 13.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP12-9:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP12-3:3
3.1 lnc-USP12-3:3
4.0 lnc-USP12-3:3
4.1 LINC00412:13
5.0 LINC00412:13
5.1 lnc-SLC7A1-26:13
5.2 lnc-USP12-9:13