Transcript: lnc-URGCP-2:11

Basic information

LNCipedia transcript ID: lnc-URGCP-2:11 
LNCipedia gene ID: lnc-URGCP-2
Location (hg38): chr7:43940056-43990265
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 18812 bp
Exons: 13
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214783.5|MICT00000322504.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 493.7416 coding 
CPAT coding probability 48.69% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-URGCP-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-URGCP-2:11
5.0 lnc-URGCP-2:11
5.1 lnc-TNS3-65:9
5.2 lnc-URGCP-2:11