Transcript: lnc-UQCRHL-3:3

Basic information

LNCipedia transcript ID: lnc-UQCRHL-3:3 
LNCipedia gene ID: lnc-UQCRHL-3
Ensembl Gene ID: ENSG00000237938
Ensembl Transcript ID: ENST00000623689
Location (hg38): chr1:15720312-15732452
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 684 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623689.3
Alternative gene names: ENSG00000237938.5; RP11-288I21.1; AL450998.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -177.5889 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UQCRHL-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AGMAT-2:3
4.1 lnc-AGMAT-2:3
5.0 lnc-AGMAT-2:3
5.1 lnc-LRRC38-22:3
5.2 lnc-UQCRHL-3:3