Transcript: lnc-UQCRFS1-3:12

Basic information

LNCipedia transcript ID: lnc-UQCRFS1-3:12 
LNCipedia gene ID: lnc-UQCRFS1-3
Location (hg38): chr19:28459139-28727671
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2590 bp
Exons: 8
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267243.1|MICT00000172317.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 129.9949 coding 
CPAT coding probability 4.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UQCRFS1-3:12 no no no no

Available literature

  1. Jin (2011), Human polymorphisms at long non-coding RNAs (lncRNAs) and association with prostate cancer risk., Carcinogenesis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UQCRFS1-3:12
5.0 lnc-UQCRFS1-3:12
5.1 lnc-SCGB2B2-120:6
5.2 lnc-UQCRFS1-3:12