Transcript: lnc-UCHL3-10:1

Basic information

LNCipedia transcript ID: lnc-UCHL3-10:1 
LNCipedia gene ID: lnc-UCHL3-10
Ensembl Gene ID: ENSG00000228444
Ensembl Transcript ID: ENST00000422931
Location (hg38): chr13:75631271-75632135
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 865 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000422931.2
Alternative gene names: ENSG00000228444.2; RP11-173B14.4; AL137244.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.8264 non-coding 
CPAT coding probability 6.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UCHL3-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UCHL3-10:1
4.0 lnc-UCHL3-10:1
4.1 lnc-UCHL3-10:1
5.0 lnc-UCHL3-10:1
5.1 lnc-COL4A2-241:1
5.2 lnc-UCHL3-10:1