Transcript: lnc-UBXN4-11:1

Basic information

LNCipedia transcript ID: lnc-UBXN4-11:1 
LNCipedia gene ID: lnc-UBXN4-11
Location (hg38): chr2:135538406-135539562
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1157 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ncRnaDb_ncrna_FR150870_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.4715 non-coding 
CPAT coding probability 5.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBXN4-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBXN4-11:1
4.0 lnc-UBXN4-11:1
4.1 lnc-UBXN4-11:1
5.0 lnc-UBXN4-11:1
5.1 lnc-GPR17-100:1
5.2 lnc-UBXN4-11:1