Transcript: lnc-UBR2-1:4

Basic information

LNCipedia transcript ID: lnc-UBR2-1:4 
LNCipedia gene ID: lnc-UBR2-1
Location (hg38): chr6:42453190-42457572
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4383 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1794:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.9857 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBR2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-UBR2-1:4
4.1 lnc-UBR2-1:4
5.0 lnc-UBR2-1:4
5.1 lnc-TREML4-23:2
5.2 lnc-UBR2-1:4