Transcript: lnc-UBLCP1-2:5

Basic information

LNCipedia transcript ID: lnc-UBLCP1-2:5 
LNCipedia gene ID: lnc-UBLCP1-2
Location (hg38): chr5:159421332-159444710
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 281 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010154; NONHSAT104827
Alternative gene names: XLOC_004620; linc-ADRA1B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.8225 non-coding 
CPAT coding probability 18.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UBLCP1-3:1
3.1 lnc-UBLCP1-4:1
4.0 lnc-UBLCP1-2:5
4.1 lnc-UBLCP1-2:5
5.0 lnc-UBLCP1-2:5
5.1 lnc-MRPL22-39:19
5.2 lnc-UBLCP1-2:5