Transcript: lnc-UBLCP1-2:16

Basic information

LNCipedia transcript ID: lnc-UBLCP1-2:16 
LNCipedia gene ID: lnc-UBLCP1-2
Ensembl Gene ID: ENSG00000249738
Ensembl Transcript ID: ENST00000636261
Location (hg38): chr5:159421214-159557687
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 551 bp
Exons: 3
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636261.1
Alternative gene names: ENSG00000249738.8; AC008697.1; ENSG00000249738.9; AC008691.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.8225 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-2:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UBLCP1-2:16
5.0 lnc-UBLCP1-2:16
5.1 lnc-MRPL22-39:17
5.2 lnc-UBLCP1-2:16