Transcript: lnc-UBE2F-1:1

Basic information

LNCipedia transcript ID: lnc-UBE2F-1:1 
LNCipedia gene ID: lnc-UBE2F-1
Location (hg38): chr2:237945755-237961908
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 475 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004063; NONHSAT077667
Alternative gene names: XLOC_001913; linc-UBE2F


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.0455 non-coding 
CPAT coding probability 7.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBE2F-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UBE2F-1:1
3.1 lnc-UBE2F-1:1
4.0 lnc-UBE2F-1:1
4.1 lnc-UBE2F-1:1
5.0 lnc-UBE2F-1:1
5.1 lnc-SCLY-4:1
5.2 lnc-UBE2F-1:1