Transcript: lnc-UBASH3B-2:7

Basic information

LNCipedia transcript ID: lnc-UBASH3B-2:7 
LNCipedia gene ID: lnc-UBASH3B-2
Location (hg38): chr11:122307229-122308566
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 565 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT024814; FPKM1_group_5533_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.0905 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBASH3B-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBASH3B-2:7
4.0 lnc-UBASH3B-2:7
4.1 lnc-UBASH3B-2:7
5.0 lnc-UBASH3B-2:7
5.1 lnc-HINFP-38:6
5.2 lnc-UBASH3B-2:7