Transcript: lnc-UBAP2-1:2

Basic information

LNCipedia transcript ID: lnc-UBAP2-1:2 
LNCipedia gene ID: lnc-UBAP2-1
Location (hg38): chr9:33909609-33911122
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 791 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT130808; ENST00000414426.3
Alternative gene names: ENSG00000230925.3; RP11-176F3.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.8882 non-coding 
CPAT coding probability 29.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBAP2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBAP2-1:2
4.0 lnc-UBAP2-1:2
4.1 lnc-UBAP2-1:2
5.0 lnc-UBAP2-1:2
5.1 lnc-CD72-51:3
5.2 lnc-UBAP2-1:2