Transcript: lnc-U2SURP-3:2

Basic information

LNCipedia transcript ID: lnc-U2SURP-3:2 
LNCipedia gene ID: lnc-U2SURP-3
Location (hg38): chr3:142926791-142934094
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 377 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006249; NONHSAT092496
Alternative gene names: XLOC_002845; linc-SR140-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.2175 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-U2SURP-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-U2SURP-2:2
3.1 lnc-U2SURP-3:2
4.0 lnc-U2SURP-3:2
4.1 lnc-U2SURP-3:2
5.0 lnc-U2SURP-3:2
5.1 lnc-PXYLP1-24:8
5.2 lnc-U2SURP-3:2