Transcript: lnc-TXNDC2-8:1

Basic information

LNCipedia transcript ID: lnc-TXNDC2-8:1 
LNCipedia gene ID: lnc-TXNDC2-8
Location (hg38): chr18:9877563-9878104
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 542 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000035108.1|ENCT00000190817.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -164.3698 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TXNDC2-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TXNDC2-8:1
5.0 lnc-TXNDC2-8:1
5.1 lnc-RIOK3-205:1
5.2 lnc-TXNDC2-8:1