Transcript: lnc-TWIST2-1:4

Basic information

LNCipedia transcript ID: lnc-TWIST2-1:4 
LNCipedia gene ID: lnc-TWIST2-1
Location (hg38): chr2:239345948-239347444
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1386 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT077799
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.5162 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TWIST2-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC062017.1.1-1:3
4.0 lnc-AC062017.1.1-1:3
4.1 lnc-AC062017.1.1-1:3
5.0 lnc-AC062017.1.1-1:3
5.1 lnc-TRAF3IP1-13:3
5.2 lnc-TWIST2-1:4