Transcript: lnc-TWIST2-1:2

Basic information

LNCipedia transcript ID: lnc-TWIST2-1:2 
LNCipedia gene ID: lnc-TWIST2-1
Location (hg38): chr2:239345420-239347150
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1452 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT077796
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 51.2328 non-coding 
CPAT coding probability 2.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TWIST2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC062017.1.1-1:1
4.0 lnc-AC062017.1.1-1:1
4.1 lnc-AC062017.1.1-1:1
5.0 lnc-AC062017.1.1-1:1
5.1 lnc-TRAF3IP1-13:1
5.2 lnc-TWIST2-1:2