Transcript: lnc-TUBGCP6-5:1

Basic information

LNCipedia transcript ID: lnc-TUBGCP6-5:1 
LNCipedia gene ID: lnc-TUBGCP6-5
Location (hg38): chr22:50199090-50200547
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 711 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608025.1
Alternative gene names: ENSG00000273253.1; RP3-402G11.26


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.8173 non-coding 
CPAT coding probability 4.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBGCP6-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUBGCP6-5:1
4.0 lnc-TUBGCP6-5:1
4.1 lnc-TUBGCP6-5:1
5.0 lnc-TUBGCP6-5:1
5.1 lnc-HDAC10-5:8
5.2 lnc-TUBGCP6-5:1