Transcript: lnc-TUBGCP3-6:2

Basic information

LNCipedia transcript ID: lnc-TUBGCP3-6:2 
LNCipedia gene ID: lnc-TUBGCP3-6
Location (hg38): chr13:112189353-112194886
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 237 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022121; NONHSAT035261
Alternative gene names: XLOC_010730; linc-ANKRD10-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.488 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBGCP3-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TUBGCP3-5:2
3.1 lnc-TUBGCP3-6:2
4.0 lnc-TUBGCP3-6:2
4.1 lnc-TUBGCP3-6:2
5.0 lnc-TUBGCP3-6:2
5.1 lnc-DCUN1D2-19:5
5.2 lnc-TUBGCP3-6:2