Transcript: lnc-TUBGCP3-14:2

Basic information

LNCipedia transcript ID: lnc-TUBGCP3-14:2 
LNCipedia gene ID: lnc-TUBGCP3-14
Location (hg38): chr13:112871348-112872791
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 584 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_929_chr13:113525661-113527105_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.7423 non-coding 
CPAT coding probability 1.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBGCP3-14:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUBGCP3-14:2
4.0 lnc-TUBGCP3-14:2
4.1 lnc-TUBGCP3-14:2
5.0 lnc-TUBGCP3-14:2
5.1 lnc-DCUN1D2-14:2
5.2 lnc-TUBGCP3-14:2