Transcript: lnc-TUBB2A-9:3

Basic information

LNCipedia transcript ID: lnc-TUBB2A-9:3 
LNCipedia gene ID: lnc-TUBB2A-9
Location (hg38): chr6:3117643-3118368
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 726 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000087173.1|FTMT22200000297.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -83.9146 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBB2A-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TUBB2A-9:3
5.0 lnc-TUBB2A-9:3
5.1 lnc-ECI2-78:5
5.2 lnc-TUBB2A-9:3