Transcript: lnc-TUBB1-2:1

Basic information

LNCipedia transcript ID: lnc-TUBB1-2:1 
LNCipedia gene ID: lnc-TUBB1-2
Location (hg38): chr20:59032568-59033105
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 538 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000053835.1|FTMT28000003130.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -190.4993 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBB1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TUBB1-2:1
5.0 lnc-TUBB1-2:1
5.1 lnc-GNAS-6:1
5.2 lnc-TUBB1-2:1