Transcript: lnc-TTLL10-3:5

Basic information

LNCipedia transcript ID: lnc-TTLL10-3:5 
LNCipedia gene ID: lnc-TTLL10-3
Location (hg38): chr1:1157498-1170977
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 12799 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272141.1|ENCT00000000215.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 50.1716 non-coding 
CPAT coding probability 73.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TTLL10-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TTLL10-3:5
5.0 lnc-TTLL10-3:5
5.1 lnc-VAMP3-112:3
5.2 lnc-TTLL10-3:5