Transcript: lnc-TTC8-9:1

Basic information

LNCipedia transcript ID: lnc-TTC8-9:1 
LNCipedia gene ID: lnc-TTC8-9
Ensembl Gene ID: ENSG00000277801
Ensembl Transcript ID: ENST00000612252
Location (hg38): chr14:89156743-89157574
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 832 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612252.1
Alternative gene names: ENSG00000277801.1; RP11-681H18.2; AL138478.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -139.2056 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC8-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-33N16.1.1-9:1
4.1 lnc-RP11-33N16.1.1-9:1
5.0 lnc-RP11-33N16.1.1-9:1
5.1 lnc-SPATA7-11:1
5.2 lnc-TTC8-9:1