Transcript: lnc-TTC30B-1:22

Basic information

LNCipedia transcript ID: lnc-TTC30B-1:22 
LNCipedia gene ID: lnc-TTC30B-1
Location (hg38): chr2:177310126-177315036
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1444 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000213963.2|HBMT00000820433.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.0746 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC30B-1:22 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TTC30B-1:22
5.0 lnc-TTC30B-1:22
5.1 lnc-SESTD1-24:20
5.2 lnc-TTC30B-1:22