Transcript: lnc-TTC30B-1:10

Basic information

LNCipedia transcript ID: lnc-TTC30B-1:10 
LNCipedia gene ID: lnc-TTC30B-1
Ensembl Gene ID: ENSG00000213963
Ensembl Transcript ID: ENST00000611493
Location (hg38): chr2:177338388-177342367
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 670 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611493.1
Alternative gene names: ENSG00000213963.6; AC074286.1; AC019080.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.2535 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC30B-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TTC30B-1:10
4.1 lnc-TTC30B-1:10
5.0 lnc-TTC30B-1:10
5.1 lnc-SESTD1-24:14
5.2 lnc-TTC30B-1:10