Transcript: lnc-TTC21A-76:2

Basic information

LNCipedia transcript ID: lnc-TTC21A-76:2 
LNCipedia gene ID: lnc-TTC21A-76
Location (hg38): chr3:39152767-39156525
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 476 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2346_chr3:39194257-39197997_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -190.6987 non-coding 
CPAT coding probability 4.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC21A-76:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTC21A-4:1
4.0 lnc-TTC21A-4:1
4.1 lnc-TTC21A-4:1
5.0 lnc-TTC21A-4:1
5.1 lnc-KLHL40-76:2
5.2 lnc-TTC21A-76:2